NEWS

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GROAN 1.3.1 (2022-11-28)

• added CITATION file with the reference to the published article
• fixed typos in the vignette

GROAN 1.3

• added new metrics: NDCG10, NDCG20, NDCG50, NDCG100. This changes the accuracies save file columns count
• now accepting fractional genotypes in Noisy Data Set objects (if explicitly allowed by the user)
• added new function phenoregressor.BGLR.multikinships to implement Bayesian GBLUP using more than one kinship matrices
• added option to set the accuracy file name (before it defaulted to "accuracy.csv")
• expanded GROAN.run interface to report the list of tested regressors

GROAN 1.2.1 (2021-04-28)

• added dependency to rmarkdown to comply to new knitr policy

GROAN 1.2

• ridge regression BLUP now supports both SNP-BLUP and G-BLUP
• plotResult function now has the option to select what to use as labels for the x axis
• typos in the documentation

GROAN 1.1

• GROAN.run now supports test on datasets different from the one used for training. Its interface, GROAN.Result object and plotResult function were changed accordingly
• a second pea dataset, GROAN.AI, was included, and the old dataset was refactored as GROAN.KI
• old dataset notation (GROAN.pea.SNPs, GROAN.pea.yield, GROAN.pea.kinship) was maintained but marked as deprecated in documentation
• added or improved print and summary function for all GROAN objects